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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915509.1_cds_XP_016465293.1_58260
CDS Infomation

[gene=LOC107788151] [db_xref=GeneID:107788151] [protein=preprotein translocase subunit SCY1, chloroplastic-like] [protein_id=XP_016465293.1] [location=join(15219..15430,16380..16522,16613..16998,17576..17875,17969..18061,18839..18962,19453..19616,20375..20602)] [gbkey=CDS]
Sequence

ATGTTGATAACGGTCAGAGAAATTTCCTCTTCTTCTTCTCTGTGCTTCAATTCTCTCATT
TCTAATACTAATAATAATTCCAAGCAGCTACACTCTCTAAAGGTAAATAGGTTCACACCC
ATTTGTAAAGCCAGCAGCCTCAGTTTCAATAGAAAAAACTCTAATACCACTGCCCCATCA
TGGAATCTTGGTCTAAATCACTCCACAAACAGCTGTGATAGTTCAGAATTTGATCCGTTA
GGTATTAATTCAGGTAAATCATCCTGGGATAATTTGGTGAGCTTGTTCTTTCAAACATTT
GAAAGTTCCTCAAATGCTAGGAAAGACAAAACTTCATCAGCTCGAGGGTTCGCAGCTGCA
ATTGAAGATACTAGCATTGATTTTGGAGATTTCTTCAAAGGTCCATTACCAGGAAAGTTT
CTAAAGCTATTAGGCTTTTTAGCTTTGTCACGACTCGGGATCTATATACCGCTTGGTGGA
GTAAATCGGGAGGCATTTGTTGGCAATTTAGATGAGAATAGTATATTAAGTACTTTGGAT
TCCTTTTCTGGTGGAGGCATAGGTCGCCTTGGAATATGTTCGCTCGGTATTGTTCCCTTC
ATCAATGCACAAATTGTGTTTCAACTTCTTGCTCAAATCTACCCCAAGTTGCAAGACCTT
CAGAAAAAAGAAGGTGAAGCTGGAAGAAAGAAAGTGCTTCAGTACACTCGCTATGCTTCC
GTTGGATTTGCCGTAGTACAGGCAATTGGCCAAGTATTATTCCTTCGTCCTTATGTCAAT
GACTTCAGTACCCAGTGGGCAATTTCTTCTATTGTTCTCTTGACCCTCGGCTCTGTACTT
ACGACGTATATTGGGGAGCGAATTACTGATTTGAAACTTGGAAATGGTACATCCCTTTTG
ATCTTTACAAATATCATATCCTACTTGCCAGCATCCTTTGGTAGGACAGTTGCACAGGCA
TATCAAGACGGTAATTATGTTGGGCTCGTTGGCATCCTAGTCTCGTTCTTCTTGCTAGTC
CTTAGCATTGTATATGTACAGGAAGCAGAGAGGAAAATTCCGCTAAATTATGCGTCAAGG
TATAGTGGCAGAACTGGAGGAGGACTTCAAAAATCTGCATACTTACCATTTAAAGTGAAC
AGTACAGGAGTAATGCCGATTATTTTCTCTACGTCATCACTAGCCCTTCCTGGTACTCTG
GCACGTTTCACTGGTGTAGGTTTCCTGAGGAATGCTGCAGCAGGTTTAAACCCTGGAGGT
TCTTACTATCTCCCGGTAAATGTTTTGTTGATTGCCTTCTTCAATTACTATTATACATTC
CTGCAATTGGACCCCGATGATGTCAGCGAACAATTGAAGCGACAAGGTGCCTCAATCCCA
CTTGTTCGACCGGGTAAAAGCACAGCAGCATTCATCAAGACGGTACTCAGCCGGATATCA
GTTCTTGGTTCGGCATTCTTGGCGGTTCTTGCTGCTGGCCCTGCTGTGATTGAACAAGCA
ACACACCTCACTGCTTTCCGGGGCTTTGCAGGCACGTCAGTGCTTATTCTCGTGGGTTGT
GCTACAGACACTGCAAGGAAAGTGCAAGCGGAGATTATATCCCAAAAGTACAAGAACATA
GAGTTTTACGACATTGATAATAAATATTGA

Peptide Sequence

PEP ID

XP_016465293.1
PEP Infomation

PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like [Nicotiana tabacum]
Sequence

MLITVREISSSSSLCFNSLISNTNNNSKQLHSLKVNRFTPICKASSLSFNRKNSNTTAPS
WNLGLNHSTNSCDSSEFDPLGINSGKSSWDNLVSLFFQTFESSSNARKDKTSSARGFAAA
IEDTSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDENSILSTLD
SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKKEGEAGRKKVLQYTRYAS
VGFAVVQAIGQVLFLRPYVNDFSTQWAISSIVLLTLGSVLTTYIGERITDLKLGNGTSLL
IFTNIISYLPASFGRTVAQAYQDGNYVGLVGILVSFFLLVLSIVYVQEAERKIPLNYASR
YSGRTGGGLQKSAYLPFKVNSTGVMPIIFSTSSLALPGTLARFTGVGFLRNAAAGLNPGG
SYYLPVNVLLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKTVLSRIS
VLGSAFLAVLAAGPAVIEQATHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI
EFYDIDNKY

Transcript Sequence

Gene sequence data has not been registered.